Fri, 30 Oct 2026 15:08:43 UTC Log in
An ultra fast and memory-efficient read aligner built by guoguo completed Thu, 29 Oct 2026 16:51:13 UTC

Description

Bowtie 2 is an ultra fast and memory-efficient tool for aligning sequencing reads to long reference sequences. It is particularly good at aligning reads of about 50 up to 100s or 1,000s of characters, and particularly good at aligning to relatively long (e.g. mammalian) genomes. Bowtie 2 indexes the genome with an FM Index to keep its memory footprint small: for the human genome, its memory footprint is typically around 3.2 GB. Bowtie 2 supports gapped, local, and paired-end alignment modes.

RPMs

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Changelog

* Wed Jul 15 2026 Fedora Release Engineering <releng@fedoraproject.org> - 2.5.4-2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_45_Mass_Rebuild

* Sun Feb 08 2026 Rasmus Ory Nielsen <ron@ron.dk> - 2.5.4-1
- Updated to 2.5.4

* Fri Jan 16 2026 Fedora Release Engineering <releng@fedoraproject.org> - 2.5.1-9
- Rebuilt for https://fedoraproject.org/wiki/Fedora_44_Mass_Rebuild

* Fri Jan 16 2026 Fedora Release Engineering <releng@fedoraproject.org> - 2.5.1-8
- Rebuilt for https://fedoraproject.org/wiki/Fedora_44_Mass_Rebuild

* Wed Jul 23 2025 Fedora Release Engineering <releng@fedoraproject.org> - 2.5.1-7
- Rebuilt for https://fedoraproject.org/wiki/Fedora_43_Mass_Rebuild

* Thu Jan 16 2025 Fedora Release Engineering <releng@fedoraproject.org> - 2.5.1-6
- Rebuilt for https://fedoraproject.org/wiki/Fedora_42_Mass_Rebuild

* Wed Jul 17 2024 Fedora Release Engineering <releng@fedoraproject.org> - 2.5.1-5
- Rebuilt for https://fedoraproject.org/wiki/Fedora_41_Mass_Rebuild