snakemake-9.16.3-1.fc45
failed
Workflow management system to create reproducible and scalable data analyses
built by guoguo
completed Thu, 29 Oct 2026 16:36:16 UTC
Description
The Snakemake workflow management system is a tool to create reproducible and
scalable data analyses. Workflows are described via a human readable, Python
based language. They can be seamlessly scaled to server, cluster, grid and
cloud environments, without the need to modify the workflow definition.
Finally, Snakemake workflows can entail a description of required software,
which will be automatically deployed to any execution environment.
%pyproject_extras_subpkg -n snakemake reports
RPMs
No RPMs
Changelog
* Fri Feb 06 2026 Benjamin A. Beasley <code@musicinmybrain.net> - 9.16.3-1 - Update to 9.16.3 (close RHBZ#2437212) * Thu Jan 29 2026 Benjamin A. Beasley <code@musicinmybrain.net> - 9.16.2-1 - Update to 9.16.2 (close RHBZ#2435340) * Wed Jan 28 2026 Benjamin A. Beasley <code@musicinmybrain.net> - 9.16.0-1 - Update to 9.16.0 (close RHBZ#2433765) * Wed Jan 21 2026 Benjamin A. Beasley <code@musicinmybrain.net> - 9.15.0-1 - Update to 9.15.0 (close RHBZ#2431519) * Fri Jan 16 2026 Benjamin A. Beasley <code@musicinmybrain.net> - 9.14.8-1 - Update to 9.14.8 (close RHBZ#2430394) * Fri Jan 16 2026 Benjamin A. Beasley <code@musicinmybrain.net> - 9.14.7-1 - Update to 9.14.7 (close RHBZ#2430197) * Thu Jan 08 2026 Benjamin A. Beasley <code@musicinmybrain.net> - 9.14.6-1 - Update to 9.14.6 (close RHBZ#2428070) * Wed Dec 17 2025 Benjamin A. Beasley <code@musicinmybrain.net> - 9.14.5-1 - Update to 9.14.5 (close RHBZ#2422268) * Tue Dec 09 2025 Benjamin A. Beasley <code@musicinmybrain.net> - 9.14.4-1 - Update to 9.14.4 (close RHBZ#2420467) * Mon Dec 08 2025 Benjamin A. Beasley <code@musicinmybrain.net> - 9.14.3-1 - Update to 9.14.3 (close RHBZ#2420015) * Sun Dec 07 2025 Benjamin A. Beasley <code@musicinmybrain.net> - 9.14.2-1 - Update to 9.14.2 (close RHBZ#2419388) * Fri Nov 07 2025 Benjamin A. Beasley <code@musicinmybrain.net> - 9.13.7-1 - Update to 9.13.7 (close RHBZ#2413438) * Thu Nov 06 2025 Benjamin A. Beasley <code@musicinmybrain.net> - 9.13.6-1 - Update to 9.13.6 (close RHBZ#2413244) * Tue Nov 04 2025 Benjamin A. Beasley <code@musicinmybrain.net> - 9.13.5-1 - Update to 9.13.5 (close RHBZ#2412283) * Wed Oct 22 2025 Benjamin A. Beasley <code@musicinmybrain.net> - 9.13.4-2 - Update to 9.13.4 (close RHBZ#2405879) * Wed Oct 22 2025 Benjamin A. Beasley <code@musicinmybrain.net> - 9.13.4-1 - Update to 9.13.4 (close RHBZ#2405879) * Sat Oct 18 2025 Benjamin A. Beasley <code@musicinmybrain.net> - 9.13.3-1 - Update to 9.13.3 (close RHBZ#2404796) * Sun Oct 12 2025 Benjamin A. Beasley <code@musicinmybrain.net> - 9.13.2-1 - Update to 9.13.2 (close RHBZ#2403372) * Sat Oct 11 2025 Benjamin A. Beasley <code@musicinmybrain.net> - 9.13.1-1 - Update to 9.13.1 (close RHBZ#2403281) * Sat Oct 11 2025 Benjamin A. Beasley <code@musicinmybrain.net> - 9.13.0-1 - Update to 9.13.0 (close RHBZ#2403096) * Sat Oct 04 2025 Benjamin A. Beasley <code@musicinmybrain.net> - 9.12.0-1 - Update to 9.12.0 (close RHBZ#2401452) * Fri Oct 03 2025 Benjamin A. Beasley <code@musicinmybrain.net> - 9.11.9-1 - Update to 9.11.9 (close RHBZ#2401257) * Thu Oct 02 2025 Benjamin A. Beasley <code@musicinmybrain.net> - 9.11.8-1 - Update to 9.11.8 (close RHBZ#2401000) * Wed Oct 01 2025 Benjamin A. Beasley <code@musicinmybrain.net> - 9.11.7-1 - Update to 9.11.7 (close RHBZ#2400624) * Thu Sep 25 2025 Benjamin A. Beasley <code@musicinmybrain.net> - 9.11.6-1 - Update to 9.11.6 (close RHBZ#2398149) * Wed Sep 24 2025 Benjamin A. Beasley <code@musicinmybrain.net> - 9.11.5-1 - Update to 9.11.5 (close RHBZ#2397632) * Sat Sep 20 2025 Benjamin A. Beasley <code@musicinmybrain.net> - 9.11.4-1 - Update to 9.11.4 (close RHBZ#2396635) * Fri Sep 19 2025 Python Maint <python-maint@redhat.com> - 9.11.3-2 - Rebuilt for Python 3.14.0rc3 bytecode * Thu Sep 18 2025 Benjamin A. Beasley <code@musicinmybrain.net> - 9.11.3-1 - Update to 9.11.3 (close RHBZ#2396346) * Thu Sep 18 2025 Benjamin A. Beasley <code@musicinmybrain.net> - 9.11.2-2 - Allow PuLP 3.3 * Tue Sep 09 2025 Benjamin A. Beasley <code@musicinmybrain.net> - 9.11.2-1 - Update to 9.11.2 (close RHBZ#2393854) * Sat Sep 06 2025 Benjamin A. Beasley <code@musicinmybrain.net> - 9.11.0-1 - Update to 9.11.0 (close RHBZ#2393559) * Mon Sep 01 2025 Benjamin A. Beasley <code@musicinmybrain.net> - 9.10.1-1 - Update to 9.10.1 (close RHBZ#2392414) * Sun Aug 31 2025 Benjamin A. Beasley <code@musicinmybrain.net> - 9.10.0-2 - Improve bootstrapping instructions in the spec file * Sat Aug 30 2025 Benjamin A. Beasley <code@musicinmybrain.net> - 9.10.0-1 - Update to 9.10.0 (close RHBZ#2391749) * Fri Aug 15 2025 Python Maint <python-maint@redhat.com> - 9.9.0-2 - Rebuilt for Python 3.14.0rc2 bytecode * Tue Jul 29 2025 Benjamin A. Beasley <code@musicinmybrain.net> - 9.9.0-1 - Update to 9.9.0 (close RHBZ#2384291) * Sat Jul 26 2025 Benjamin A. Beasley <code@musicinmybrain.net> - 9.8.2-1 - Update to 9.8.2 (close RHBZ#2383550) * Fri Jul 25 2025 Fedora Release Engineering <releng@fedoraproject.org> - 9.8.1-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_43_Mass_Rebuild * Mon Jul 21 2025 Benjamin A. Beasley <code@musicinmybrain.net> - 9.8.1-1 - Update to 9.8.1 (close RHBZ#2382290) * Fri Jul 11 2025 Benjamin A. Beasley <code@musicinmybrain.net> - 9.8.0-1 - Update to 9.8.0 (close RHBZ#2379466) * Fri Jul 04 2025 Benjamin A. Beasley <code@musicinmybrain.net> - 9.7.1-1 - Update to 9.7.1 (close RHBZ#2376436) * Tue Jun 24 2025 Benjamin A. Beasley <code@musicinmybrain.net> - 9.6.2-1 - Update to 9.6.2 (close RHBZ#2374535) * Mon Jun 23 2025 Benjamin A. Beasley <code@musicinmybrain.net> - 9.6.1-1 - Update to 9.6.1 - Skip one flaky test * Wed Jun 18 2025 Benjamin A. Beasley <code@musicinmybrain.net> - 9.5.1^20250612git6dee2b5-2 - Re-enable tests requiring google-cloud-storage * Thu Jun 12 2025 Benjamin A. Beasley <code@musicinmybrain.net> - 9.5.1^20250612git6dee2b5-1 - Update to a snapshot to address a Python 3.14 regression - Do a non-bootstrap build * Thu Jun 12 2025 Benjamin A. Beasley <code@musicinmybrain.net> - 9.5.1-4 - Bootstrap for Python 3.14 (close RHBZ#2372222) * Thu Jun 12 2025 Benjamin A. Beasley <code@musicinmybrain.net> - 9.5.1-3 - Work around broken python-google-cloud-storage * Thu May 29 2025 Benjamin A. Beasley <code@musicinmybrain.net> - 9.5.1-2 - Allow PuLP 3.2 * Sun May 25 2025 Benjamin A. Beasley <code@musicinmybrain.net> - 9.5.1-1 - Update to 9.5.1 (close RHBZ#2367769) * Fri May 16 2025 Benjamin A. Beasley <code@musicinmybrain.net> - 9.4.0-1 - Update to 9.4.0 (close RHBZ#2366656) * Sun May 11 2025 Benjamin A. Beasley <code@musicinmybrain.net> - 9.3.4-3 - Update .rpmlintrc file for current rpmlint * Fri May 09 2025 Benjamin A. Beasley <code@musicinmybrain.net> - 9.3.4-2 - Stop using Packit, since we must run a script to generate the asset- bundle source * Fri May 09 2025 Packit <hello@packit.dev> - 9.3.4-1 - Update to 9.3.4 upstream release - Resolves: rhbz#2309617 * Fri May 09 2025 Benjamin A. Beasley <code@musicinmybrain.net> - 9.3.3-1 - Update to 9.3.3 (close RHBZ#2309617) * Thu May 08 2025 Benjamin A. Beasley <code@musicinmybrain.net> - 8.30.0-3 - Update .rpmlintrc file for latest rpmlint and snakemake versions * Thu May 08 2025 Benjamin A. Beasley <code@musicinmybrain.net> - 8.30.0-2 - F41+: Use the provisional pyproject declarative buildsystem * Fri Mar 21 2025 Benjamin A. Beasley <code@musicinmybrain.net> - 8.30.0-1 - Update to 8.30.0 - Add a weak dependency on R-core - An asset bundle for offline HTML report generation is now included; this has required significant additional “machinery” to package properly, and adds many terms to the License field. * Sun Jan 19 2025 Fedora Release Engineering <releng@fedoraproject.org> - 8.18.2-5 - Rebuilt for https://fedoraproject.org/wiki/Fedora_42_Mass_Rebuild * Sun Oct 13 2024 Benjamin A. Beasley <code@musicinmybrain.net> - 8.18.2-4 - Allow pulp 2.9 * Fri Sep 20 2024 Benjamin A. Beasley <code@musicinmybrain.net> - 8.18.2-3 - Stop trying to generate BR’s from removed extras * Fri Aug 23 2024 Benjamin A. Beasley <code@musicinmybrain.net> - 8.18.2-2 - No longer conditionalize conda tests * Fri Aug 23 2024 Packit <hello@packit.dev> - 8.18.2-1 - Update to 8.18.2 upstream release - Resolves: rhbz#2307480 * Thu Aug 15 2024 Packit <hello@packit.dev> - 8.18.0-1 - Update to 8.18.0 upstream release - Resolves: rhbz#2305095 * Tue Aug 13 2024 Packit <hello@packit.dev> - 8.17.0-1 - Update to 8.17.0 upstream release - Resolves: rhbz#2304309 * Sun Aug 04 2024 Benjamin A. Beasley <code@musicinmybrain.net> - 8.16.0-4 - Run tests the way upstream expects - The result is that we run many more tests * Thu Aug 01 2024 Benjamin A. Beasley <code@musicinmybrain.net> - 8.16.0-3 - Rely on python-unversioned-command - This seems to be the best compromise around portable remote execution * Sat Jul 20 2024 Fedora Release Engineering <releng@fedoraproject.org> - 8.16.0-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_41_Mass_Rebuild * Thu Jul 11 2024 Packit <hello@packit.dev> - 8.16.0-1 - Update to 8.16.0 upstream release - Resolves: rhbz#2297081 * Fri Jul 05 2024 Packit <hello@packit.dev> - 8.15.2-1 - Update to 8.15.2 upstream release - Resolves: rhbz#2295978 * Wed Jun 12 2024 Packit <hello@packit.dev> - 8.14.0-1 - Update to 8.14.0 upstream release - Resolves: rhbz#2292066 * Sun Jun 09 2024 Python Maint <python-maint@redhat.com> - 8.13.0-3 - Rebuilt for Python 3.13 * Sun Jun 09 2024 Python Maint <python-maint@redhat.com> - 8.13.0-2 - Bootstrap for Python 3.13 * Thu Jun 06 2024 Packit <hello@packit.dev> - 8.13.0-1 - Update to 8.13.0 upstream release - Resolves: rhbz#2290700 * Mon May 27 2024 Packit <hello@packit.dev> - 8.12.0-1 - Update to 8.12.0 upstream release - Resolves: rhbz#2283549 * Fri May 17 2024 Packit <hello@packit.dev> - 8.11.6-1 - Update to 8.11.6 upstream release - Resolves: rhbz#2280990 * Sat May 04 2024 Packit <hello@packit.dev> - 8.11.3-1 - Update to 8.11.3 upstream release - Resolves: rhbz#2278739 * Wed May 01 2024 Packit <hello@packit.dev> - 8.11.1-1 - Update to 8.11.1 upstream release - Resolves: rhbz#2278140 * Thu Apr 25 2024 Packit <hello@packit.dev> - 8.11.0-1 - Update to 8.11.0 upstream release - Resolves: rhbz#2276195 * Sat Apr 20 2024 Packit <hello@packit.dev> - 8.10.8-1 - Update to 8.10.8 upstream release - Resolves: rhbz#2276195 * Sat Apr 13 2024 Packit <hello@packit.dev> - 8.10.7-1 - Update to 8.10.7 upstream release - Resolves: rhbz#2274843 * Thu Apr 04 2024 Packit <hello@packit.dev> - 8.10.6-1 - Update to 8.10.6 upstream release - Resolves: rhbz#2273536 * Thu Mar 28 2024 Packit <hello@packit.dev> - 8.10.4-1 - [packit] 8.10.4 upstream release - Resolves: rhbz#2271076 * Wed Mar 20 2024 Packit <hello@packit.dev> - 8.9.0-1 - [packit] 8.9.0 upstream release - Resolves rhbz#2270394 * Fri Mar 15 2024 Benjamin A. Beasley <code@musicinmybrain.net> - 8.8.0-1 - Update to 8.8.0 * Thu Mar 14 2024 Packit <hello@packit.dev> - 8.7.0-1 - [packit] 8.7.0 upstream release - Resolves rhbz#2269498 * Tue Mar 12 2024 Benjamin A. Beasley <code@musicinmybrain.net> - 8.6.0-2 - Non-bootstrap build of snakemake 8.6.0 * Tue Mar 12 2024 Packit <hello@packit.dev> - 8.6.0-1 - [packit] 8.6.0 upstream release (bootstrap) - Resolves rhbz#2269081 * Mon Mar 11 2024 Benjamin A. Beasley <code@musicinmybrain.net> - 8.5.5-2 - Patch to allow smart_open 7.x * Fri Mar 08 2024 Packit <hello@packit.dev> - 8.5.5-1 - [packit] 8.5.5 upstream release - Resolves rhbz#2268576 * Thu Mar 07 2024 Packit <hello@packit.dev> - 8.5.4-1 - [packit] 8.5.4 upstream release - Resolves rhbz#2268374 * Mon Feb 26 2024 Benjamin A. Beasley <code@musicinmybrain.net> - 8.5.3-1 - Update to 8.5.3 * Sun Feb 25 2024 Packit <hello@packit.dev> - 8.5.2-1 - [packit] 8.5.2 upstream release - Resolves rhbz#2265871 * Wed Feb 21 2024 Packit <hello@packit.dev> - 8.4.12-1 - [packit] 8.4.12 upstream release - Resolves rhbz#2265048 * Sun Feb 18 2024 Packit <hello@packit.dev> - 8.4.9-1 - [packit] 8.4.9 upstream release - Resolves rhbz#2263559 * Fri Feb 09 2024 Packit <hello@packit.dev> - 8.4.8-1 - [packit] 8.4.8 upstream release - Resolves rhbz#2263559 * Thu Feb 08 2024 Packit <hello@packit.dev> - 8.4.7-1 - [packit] 8.4.7 upstream release - Resolves rhbz#2263390 * Wed Feb 07 2024 Packit <hello@packit.dev> - 8.4.6-1 - [packit] 8.4.6 upstream release - Resolves rhbz#2263115